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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9883675 chr3:90310464 A/G STX19 chr3:93733213-93747454:- 0.41 6.42 3.36E-10 Box Plot
THCA rs9885210 chr5:176569188 T/C LOC388955 chr2:63849182-63850159:- -0.69 -18.04 7.48E-56 Box Plot
THCA rs9886639 chr8:11784529 G/T SGK223 chr8:8175258-8244008:- -0.44 -8.14 3.56E-15 Box Plot
THCA rs988825 chr2:99575715 A/G RMND5A chr2:86947296-87005164:+ 0.35 5.91 6.5E-9 Box Plot
THCA rs9896243 chr17:44826056 C/G C17orf69 chr17:43716341-43723594:+ 0.49 10.23 2.34E-22 Box Plot
THCA rs9896243 chr17:44826056 C/G LOC644172 chr17:43677491-43679748:- 1.07 17.01 4.5E-51 Box Plot
THCA rs9896243 chr17:44826056 C/G LRRC37A4 chr17:43578685-43595516:- -0.74 -17.86 4.95E-55 Box Plot
THCA rs9896243 chr17:44826056 C/G MGC57346 chr17:43697712-43715327:+ 0.51 9.61 4.15E-20 Box Plot
THCA rs9896243 chr17:44826056 C/G PLEKHM1 chr17:43513266-43568115:- 0.39 7.76 5.31E-14 Box Plot
THCA rs9898631 chr17:18192393 C/G LOC162632 chr17:16614993-16707819:+ 0.39 6.38 4.08E-10 Box Plot
THCA rs9898727 chr17:63853637 T/C BPGM chr7:134331560-134364565:+ 0.33 6.02 3.53E-9 Box Plot
THCA rs9914034 chr17:63855498 T/C BPGM chr7:134331560-134364565:+ 0.32 5.97 4.69E-9 Box Plot
THCA rs9921896 chr16:17386703 A/C LARP1B chr4:128982423-129144086:+ -0.39 -5.92 6.3E-9 Box Plot
THCA rs9934387 chr16:20472863 A/G ZMYND12 chr1:42896000-42921938:- 0.26 5.94 5.63E-9 Box Plot
THCA rs9937581 chr16:20473903 G/A ZMYND12 chr1:42896000-42921938:- 0.26 5.94 5.63E-9 Box Plot